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A DNA Computing Model for the Graph Vertex Coloring Problem Based on a Probe Graph Article
Jin Xu, Xiaoli Qiang, Kai Zhang, Cheng Zhang, Jing Yang
Engineering 2018, Volume 4, Issue 1, Pages 61-77 doi: 10.1016/j.eng.2018.02.011
The biggest bottleneck in DNA computing is exponential explosion, in which the DNA molecules usedTo overcome this bottleneck and improve the processing speed, we propose a DNA computing model to solvecomputing model.All these tiny strands are operated by DNA self-assembly and parallel PCR.computing model was proposed by Adleman’s research group in 2002 (with a searching capability
Keywords: DNA computing Graph vertex coloring problem Polymerase chain reaction
Engineering DNA Materials for Sustainable Data Storage Using a DNA Movable-Type System Article
Zi-Yi Gong, Li-Fu Song, Guang-Sheng Pei, Yu-Fei Dong, Bing-Zhi Li, Ying-Jin Yuan
Engineering 2023, Volume 29, Issue 10, Pages 130-136 doi: 10.1016/j.eng.2022.05.023
DNA molecules are green materials with great potential for high-density and long-term data storageHowever, the current data-writing process of DNA data storage via DNA synthesis suffers from high costsHere, we developed a DNA movable-type storage system that can utilize DNA fragments pre-produced by cellIn this system, these pre-generated DNA fragments, referred to herein as "DNA movable types,"the costly and environmentally hazardous process of de novo DNA synthesis.
Keywords: 合成生物学 DNA信息存储 DNA活字存储系统 经济性DNA数据存储
The role of PARP1 in the DNA damage response and its application in tumor therapy
Zhifeng Wang, Fengli Wang, Tieshan Tang, Caixia Guo
Frontiers of Medicine 2012, Volume 6, Issue 2, Pages 156-164 doi: 10.1007/s11684-012-0197-3
Keywords: PARP1 synthetic lethality PARP inhibitor DNA repair cancer NHEJ
Functional role of ATM in the cellular response to DNA damage
Ming LIU, Wenxiang HU
Frontiers of Chemical Science and Engineering 2011, Volume 5, Issue 2, Pages 179-187 doi: 10.1007/s11705-009-0268-4
Keywords: ataxia-telangiectasia mutated (ATM) cell cycle checkpoint DNA damage signalling transduction
Generation and repair of AID-initiated DNA lesions in B lymphocytes
Zhangguo Chen,Jing H. Wang
Frontiers of Medicine 2014, Volume 8, Issue 2, Pages 201-216 doi: 10.1007/s11684-014-0324-4
Keywords: class switch recombination somatic hypermutation activation-induced deaminase DNA repair genomic instability
Molecular simulation of the interaction mechanism between CodY protein and DNA in
Linchen Yuan, Hao Wu, Yue Zhao, Xiaoyu Qin, Yanni Li
Frontiers of Chemical Science and Engineering 2019, Volume 13, Issue 1, Pages 133-139 doi: 10.1007/s11705-018-1737-4
Keywords: CodY DNA molecular docking molecular dynamics
Yi Cao
Frontiers of Medicine 2015, Volume 9, Issue 3, Pages 261-274 doi: 10.1007/s11684-015-0406-y
Keywords: environmental pollution DNA methylation cancer biomarker diagnosis therapy prevention
Edge Computing Technology: Development and Countermeasures
Hong Xuehai and Wang Yang
Strategic Study of CAE 2018, Volume 20, Issue 2, Pages 20-26 doi: 10.15302/J-SSCAE-2018.02.004
Edge computing is an emerging technology that reduces transmission delaysand bandwidth consumption by placing computing, storage, bandwidth, applications, and other resourcesMobile terminals, Internet of things, and other devices provide the necessary front-end support for computingThis paper discusses the concept of edge computing, key problems that require solutions, main advancesin edge computing, influence of edge computing developments, and opportunities and development countermeasures
Keywords: cloud computing edge computing fog computing mobile edge computing internet of things front-end
Effects of DNA damage on oocyte meiotic maturation and early embryonic development
Shen YIN,Junyu MA,Wei SHEN
Frontiers of Agricultural Science and Engineering 2014, Volume 1, Issue 3, Pages 185-190 doi: 10.15302/J-FASE-2014035
Keywords: DNA damage double-strand breaks (DSBs) oocyte embryo
Single-Molecule Methods for Characterizing Different DNA Higher-Order Structures Review
Yonglin Liu, Tianyuan Bian, Yan Liu, Zhimin Li, Yufeng Pei, Jie Song
Engineering 2023, Volume 24, Issue 5, Pages 277-292 doi: 10.1016/j.eng.2022.10.009
DNA is considered to be not only a carrier of the genetic information of life but also a highly programmableDifferent DNA structures are related to their biological and chemical functions.However, the bulk assay ignores the heterogeneity of DNA structures in solution.(ss/dsDNA), DNA higher-order structures, and DNA nanostructures.methods to understand the biophysical properties of DNA and other bio-matter and soft matter.
Keywords: Single-molecule methods DNA structure Mechanical properties Conformational transitions
Bridging the gap: Neuro-Symbolic Computing for advanced AI applications in construction
Frontiers of Engineering Management Pages 727-735 doi: 10.1007/s42524-023-0266-0
Keywords: advanced AI in construction safety and quality inspection Neuro-Symbolic Computing Deep Learning
Frontiers of Chemical Science and Engineering 2022, Volume 16, Issue 1, Pages 92-102 doi: 10.1007/s11705-021-2063-9
Keywords: hydrolysis reaction mitochondrial DNA damage in situ hydrophobic environment trigger fluorescence
Bacterial inactivation, DNA damage, and faster ATP degradation induced by ultraviolet disinfection
Chao Yang, Wenjun Sun, Xiuwei Ao
Frontiers of Environmental Science & Engineering 2020, Volume 14, Issue 1, doi: 10.1007/s11783-019-1192-6
Keywords: UV disinfection DNA damage qPCR ATP
Menglu Zhang, Sheng Chen, Xin Yu, Peter Vikesland, Amy Pruden
Frontiers of Environmental Science & Engineering 2019, Volume 13, Issue 3, doi: 10.1007/s11783-019-1124-5
Extracellular DNA structure damaged by chlorination was characterizedlistitem> Typical chlorine doses will likely effectively diminish extracellular DNA Plasmid DNA/ARGs were less readily broken downthan genomic DNA.listitem> The Bioanalyzer methodology effectively documented damage incurred to DNA
Keywords: Antibiotic resistance Antibiotic resistance genes (ARGs) Extracellular DNA/ARGs Chlorination
High End Computing in China and the Exploration of “Sunway” Computers
Chen Zuoning
Strategic Study of CAE 2004, Volume 6, Issue 9, Pages 23-28
In the beginning of the 21st century, driven by application requirements, the research and development of HEC are getting a new upsurge both in China and abroad. This paper analyses the development status and trends of international HEC, describes the overall development and application status of HEC in China, introduces the major technical features and application achievements of Sunway series high-performance computers; discusses the problems faced by today's HEC technologies, and finally makes some suggestions on how to extend progress in the HEC industry in China.
Keywords: high-end computing grid computing high performance service high productivity computing total cost of
Title Author Date Type Operation
A DNA Computing Model for the Graph Vertex Coloring Problem Based on a Probe Graph
Jin Xu, Xiaoli Qiang, Kai Zhang, Cheng Zhang, Jing Yang
Journal Article
Engineering DNA Materials for Sustainable Data Storage Using a DNA Movable-Type System
Zi-Yi Gong, Li-Fu Song, Guang-Sheng Pei, Yu-Fei Dong, Bing-Zhi Li, Ying-Jin Yuan
Journal Article
The role of PARP1 in the DNA damage response and its application in tumor therapy
Zhifeng Wang, Fengli Wang, Tieshan Tang, Caixia Guo
Journal Article
Generation and repair of AID-initiated DNA lesions in B lymphocytes
Zhangguo Chen,Jing H. Wang
Journal Article
Molecular simulation of the interaction mechanism between CodY protein and DNA in
Linchen Yuan, Hao Wu, Yue Zhao, Xiaoyu Qin, Yanni Li
Journal Article
Environmental pollution and DNA methylation: carcinogenesis, clinical significance, and practical applications
Yi Cao
Journal Article
Edge Computing Technology: Development and Countermeasures
Hong Xuehai and Wang Yang
Journal Article
Effects of DNA damage on oocyte meiotic maturation and early embryonic development
Shen YIN,Junyu MA,Wei SHEN
Journal Article
Single-Molecule Methods for Characterizing Different DNA Higher-Order Structures
Yonglin Liu, Tianyuan Bian, Yan Liu, Zhimin Li, Yufeng Pei, Jie Song
Journal Article
Bridging the gap: Neuro-Symbolic Computing for advanced AI applications in construction
Journal Article
hydrophobic environment triggering reactive fluorescence probe to real-time monitor mitochondrial DNA
Journal Article
Bacterial inactivation, DNA damage, and faster ATP degradation induced by ultraviolet disinfection
Chao Yang, Wenjun Sun, Xiuwei Ao
Journal Article
Degradation of extracellular genomic, plasmid DNA and specific antibiotic resistance genes by chlorination
Menglu Zhang, Sheng Chen, Xin Yu, Peter Vikesland, Amy Pruden
Journal Article